Cluster: Rep_2156_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2156
- CGC Family ID: CGCFAM_01344
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2156_c_13 | Rep_2156_c_13_139 | 147972 | 150374 | + | GH94 |
| peptidase | Rep_2156_c_13 | Rep_2156_c_13_140 | 150484 | 151032 | + | S14.UPW |
| peptidase | Rep_2156_c_13 | Rep_2156_c_13_141 | 151046 | 151249 | + | S14.UPW |
| TC | Rep_2156_c_13 | Rep_2156_c_13_142 | 151314 | 154286 | + | 3.A.12.1.1 |
Gene ID: Rep_2156_c_13_139
Type: CAZyme
Location: 147972 - 150374 (+)
Type: CAZyme
Location: 147972 - 150374 (+)
Gene ID: Rep_2156_c_13_140
Type: peptidase
Location: 150484 - 151032 (+)
Type: peptidase
Location: 150484 - 151032 (+)
Gene ID: Rep_2156_c_13_141
Type: peptidase
Location: 151046 - 151249 (+)
Type: peptidase
Location: 151046 - 151249 (+)
Gene ID: Rep_2156_c_13_142
Type: TC
Location: 151314 - 154286 (+)
Type: TC
Location: 151314 - 154286 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.