Genome Details
Selected Rep_genome_ID: Rep_1935
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp900549385
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MurphyR_2019_SRR7411378_bin.1 | 2,228,257 | 100% | 0% | New_Zealand | Oceania | ELGG |
| Rep_1935 | 2,255,591 | 99.8117% | 0% | NA | NA | WIS |
| SPMP101_bin.34 | 1,996,136 | 92.9% | 0% | Singapore | Asia | SPMP |
| SPMP29_bin.37 | 2,130,350 | 98.3% | 0.6% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_1935_CGC9 | CGCFAM_00282 | Yes | 3 | 1 | |
| Rep_1935_CGC1 | CGCFAM_01068 | Yes | 3 | 1 | |
| Rep_1935_CGC14 | CGCFAM_01068 | Yes | 3 | 1 | |
| Rep_1935_CGC16 | CGCFAM_02042 | Yes | 5 | 1 | |
| Rep_1935_CGC3 | CGCFAM_03756 | Yes | 11 | 1 | |
| Rep_1935_CGC4 | CGCFAM_04921 | Yes | 4 | 1 | |
| Rep_1935_CGC11 | CGCFAM_06235 | Yes | 27 | 2 | |
| Rep_1935_CGC15 | CGCFAM_08117 | Yes | 8 | 1 | |
| Rep_1935_CGC10 | CGCFAM_11242 | Yes | 8 | 1 |
Top CAZyme Families