Cluster: Rep_1935_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1935
- CGC Family ID: CGCFAM_00282
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1935_c_0 | Rep_1935_c_0_949 | 1000485 | 1001330 | - | 2.A.66.2.1 |
| TC | Rep_1935_c_0 | Rep_1935_c_0_950 | 1001375 | 1001758 | - | 2.A.66.2.10 |
| CAZyme | Rep_1935_c_0 | Rep_1935_c_0_951 | 1001762 | 1002775 | - | GT2 |
Gene ID: Rep_1935_c_0_949
Type: TC
Location: 1000485 - 1001330 (-)
Type: TC
Location: 1000485 - 1001330 (-)
Gene ID: Rep_1935_c_0_950
Type: TC
Location: 1001375 - 1001758 (-)
Type: TC
Location: 1001375 - 1001758 (-)
Gene ID: Rep_1935_c_0_951
Type: CAZyme
Location: 1001762 - 1002775 (-)
Type: CAZyme
Location: 1001762 - 1002775 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp900549385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.