Cluster: Rep_1935_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1935
- CGC Family ID: CGCFAM_04921
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1935_c_0 | Rep_1935_c_0_529 | 570232 | 570825 | + | CE4 |
| NULL(UNKNOWN) | Rep_1935_c_0 | Rep_1935_c_0_530 | 570842 | 571084 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1935_c_0 | Rep_1935_c_0_531 | 571181 | 572347 | - | Fe-ADH | ADH_Fe_C |
| TC | Rep_1935_c_0 | Rep_1935_c_0_532 | 572490 | 573368 | - | 2.A.7.7.2 |
Gene ID: Rep_1935_c_0_529
Type: CAZyme
Location: 570232 - 570825 (+)
Type: CAZyme
Location: 570232 - 570825 (+)
Gene ID: Rep_1935_c_0_530
Type:
Location: 570842 - 571084 (+)
Type:
Location: 570842 - 571084 (+)
Gene ID: Rep_1935_c_0_531
Type: pfam
Location: 571181 - 572347 (-)
Type: pfam
Location: 571181 - 572347 (-)
Gene ID: Rep_1935_c_0_532
Type: TC
Location: 572490 - 573368 (-)
Type: TC
Location: 572490 - 573368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp900549385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.