Cluster: Rep_1935_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1935
- CGC Family ID: CGCFAM_01068
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1935_c_0 | Rep_1935_c_0_1843 | 1923187 | 1924146 | + | 2.A.28.2.4 |
| CAZyme | Rep_1935_c_0 | Rep_1935_c_0_1844 | 1924184 | 1925596 | + | AA4 |
| TC | Rep_1935_c_0 | Rep_1935_c_0_1845 | 1925782 | 1927092 | + | 2.A.1.82.4 |
Gene ID: Rep_1935_c_0_1843
Type: TC
Location: 1923187 - 1924146 (+)
Type: TC
Location: 1923187 - 1924146 (+)
Gene ID: Rep_1935_c_0_1844
Type: CAZyme
Location: 1924184 - 1925596 (+)
Type: CAZyme
Location: 1924184 - 1925596 (+)
Gene ID: Rep_1935_c_0_1845
Type: TC
Location: 1925782 - 1927092 (+)
Type: TC
Location: 1925782 - 1927092 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter sp900549385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.