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Cluster: Rep_1935_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1935_c_0 Rep_1935_c_0_1323 1352214 1353539 - 2.A.1.3.57
CAZyme Rep_1935_c_0 Rep_1935_c_0_1324 1353652 1355052 + AA4
pfam Rep_1935_c_0 Rep_1935_c_0_1325 1355212 1355757 - Flavodoxin_2 | FMN_red
TC Rep_1935_c_0 Rep_1935_c_0_1326 1356503 1357324 + 3.A.1.24.1
pfam Rep_1935_c_0 Rep_1935_c_0_1327 1357456 1357695 + TSCPD
TC Rep_1935_c_0 Rep_1935_c_0_1328 1357881 1360037 + 4.A.1.1.9
pfam Rep_1935_c_0 Rep_1935_c_0_1329 1360063 1360452 + NusG_II
TC Rep_1935_c_0 Rep_1935_c_0_1330 1360463 1360984 + 2.A.87.3.3
Gene ID: Rep_1935_c_0_1323
Type: TC
Location: 1352214 - 1353539 (-)
Gene ID: Rep_1935_c_0_1324
Type: CAZyme
Location: 1353652 - 1355052 (+)
Gene ID: Rep_1935_c_0_1325
Type: pfam
Location: 1355212 - 1355757 (-)
Gene ID: Rep_1935_c_0_1326
Type: TC
Location: 1356503 - 1357324 (+)
Gene ID: Rep_1935_c_0_1327
Type: pfam
Location: 1357456 - 1357695 (+)
Gene ID: Rep_1935_c_0_1328
Type: TC
Location: 1357881 - 1360037 (+)
Gene ID: Rep_1935_c_0_1329
Type: pfam
Location: 1360063 - 1360452 (+)
Gene ID: Rep_1935_c_0_1330
Type: TC
Location: 1360463 - 1360984 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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