Genome Details
Selected Rep_genome_ID: Rep_177
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella lascolaii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C124.bin_17 | 3,301,462 | 98.11% | 0.56% | China(Inner Mongolia) | Asia | IMGG |
| HRGMv2_0318 | 3,190,565 | 98.87% | 0% | Japan | Asia | HRGM |
| MGYG000001164 | 3,302,780 | 97.61% | 0% | Austria | Europe | UHGG |
| Rep_177 | 3,299,855 | 99.1856% | 0.123457% | NA | NA | WIS |
| SW116_77_sub | 3,355,803 | 99.25% | 0.12% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_177_CGC23 | CGCFAM_00001 | Yes | 8 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| Rep_177_CGC38 | CGCFAM_00048 | Yes | 9 | 3 | |
| Rep_177_CGC5 | CGCFAM_00059 | Yes | 5 | 2 | |
| Rep_177_CGC8 | CGCFAM_00080 | Yes | 4 | 1 | |
| Rep_177_CGC21 | CGCFAM_00109 | Yes | 10 | 4 | host glycan |
| Rep_177_CGC39 | CGCFAM_00200 | Yes | 7 | 2 | |
| Rep_177_CGC35 | CGCFAM_00618 | Yes | 11 | 7 | |
| Rep_177_CGC10 | CGCFAM_00629 | Yes | 5 | 1 | |
| Rep_177_CGC37 | CGCFAM_00837 | Yes | 5 | 2 | |
| Rep_177_CGC3 | CGCFAM_00881 | Yes | 6 | 1 | |
| Rep_177_CGC34 | CGCFAM_01047 | Yes | 5 | 1 | |
| Rep_177_CGC7 | CGCFAM_02091 | Yes | 6 | 3 | |
| Rep_177_CGC13 | CGCFAM_02213 | Yes | 5 | 2 | |
| Rep_177_CGC32 | CGCFAM_02386 | Yes | 8 | 2 | |
| Rep_177_CGC6 | CGCFAM_04562 | Yes | 5 | 1 | |
| Rep_177_CGC26 | CGCFAM_05762 | Yes | 6 | 1 | |
| Rep_177_CGC33 | CGCFAM_05971 | Yes | 12 | 4 | |
| Rep_177_CGC17 | CGCFAM_05972 | Yes | 8 | 1 | |
| Rep_177_CGC20 | CGCFAM_05973 | Yes | 11 | 3 | |
| Rep_177_CGC24 | CGCFAM_09579 | Yes | 5 | 1 | |
| Rep_177_CGC16 | CGCFAM_09580 | Yes | 15 | 2 |
Top CAZyme Families