Cluster: Rep_177_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_177
- CGC Family ID: CGCFAM_00200
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_177_c_0 | Rep_177_c_0_2468 | 3028470 | 3029252 | + | GT2 |
| NULL(UNKNOWN) | Rep_177_c_0 | Rep_177_c_0_2469 | 3029374 | 3030396 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_177_c_0 | Rep_177_c_0_2470 | 3030814 | 3032952 | + | GH3 |
| pfam | Rep_177_c_0 | Rep_177_c_0_2471 | 3033816 | 3034652 | - | PBP_like_2 | SBP_bac_11 |
| TC | Rep_177_c_0 | Rep_177_c_0_2472 | 3034845 | 3036029 | + | 3.A.1.7.5 |
| TC | Rep_177_c_0 | Rep_177_c_0_2473 | 3036045 | 3036932 | + | 3.A.1.7.2 |
| TC | Rep_177_c_0 | Rep_177_c_0_2474 | 3036976 | 3037728 | + | 3.A.1.7.1 |
Gene ID: Rep_177_c_0_2468
Type: CAZyme
Location: 3028470 - 3029252 (+)
Type: CAZyme
Location: 3028470 - 3029252 (+)
Gene ID: Rep_177_c_0_2469
Type:
Location: 3029374 - 3030396 (+)
Type:
Location: 3029374 - 3030396 (+)
Gene ID: Rep_177_c_0_2470
Type: CAZyme
Location: 3030814 - 3032952 (+)
Type: CAZyme
Location: 3030814 - 3032952 (+)
Gene ID: Rep_177_c_0_2471
Type: pfam
Location: 3033816 - 3034652 (-)
Type: pfam
Location: 3033816 - 3034652 (-)
Gene ID: Rep_177_c_0_2472
Type: TC
Location: 3034845 - 3036029 (+)
Type: TC
Location: 3034845 - 3036029 (+)
Gene ID: Rep_177_c_0_2473
Type: TC
Location: 3036045 - 3036932 (+)
Type: TC
Location: 3036045 - 3036932 (+)
Gene ID: Rep_177_c_0_2474
Type: TC
Location: 3036976 - 3037728 (+)
Type: TC
Location: 3036976 - 3037728 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella lascolaii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.