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Cluster: Rep_177_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_177_c_0 Rep_177_c_0_1201 1403834 1405180 - 2.A.66.1.28
pfam Rep_177_c_0 Rep_177_c_0_1202 1405283 1405459 - DUF4250
TC Rep_177_c_0 Rep_177_c_0_1203 1405827 1406711 + 1.A.23.4.1
sulfatase Rep_177_c_0 Rep_177_c_0_1204 1407703 1410408 - S1_4
CAZyme Rep_177_c_0 Rep_177_c_0_1205 1410525 1414976 - GH2
NULL(UNKNOWN) Rep_177_c_0 Rep_177_c_0_1206 1415111 1415263 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_177_c_0 Rep_177_c_0_1207 1416360 1417277 - HHH_3 | HHH_3
TC Rep_177_c_0 Rep_177_c_0_1208 1417296 1418657 - 2.A.22.5.3
Gene ID: Rep_177_c_0_1201
Type: TC
Location: 1403834 - 1405180 (-)
Gene ID: Rep_177_c_0_1202
Type: pfam
Location: 1405283 - 1405459 (-)
Gene ID: Rep_177_c_0_1203
Type: TC
Location: 1405827 - 1406711 (+)
Gene ID: Rep_177_c_0_1204
Type: sulfatase
Location: 1407703 - 1410408 (-)
Gene ID: Rep_177_c_0_1205
Type: CAZyme
Location: 1410525 - 1414976 (-)
Gene ID: Rep_177_c_0_1206
Type:
Location: 1415111 - 1415263 (+)
Gene ID: Rep_177_c_0_1207
Type: pfam
Location: 1416360 - 1417277 (-)
Gene ID: Rep_177_c_0_1208
Type: TC
Location: 1417296 - 1418657 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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