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Cluster: Rep_177_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_177_c_0 Rep_177_c_0_1844 2278241 2281822 - GH2
NULL(UNKNOWN) Rep_177_c_0 Rep_177_c_0_1845 2282208 2282528 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_177_c_0 Rep_177_c_0_1846 2282634 2284295 + GH32
pfam Rep_177_c_0 Rep_177_c_0_1847 2284517 2285632 - HlyD_3 | HlyD_D23
TC Rep_177_c_0 Rep_177_c_0_1848 2285758 2287002 - 3.A.1.122.2
TC Rep_177_c_0 Rep_177_c_0_1849 2287049 2288311 - 3.A.1.122.2
TC Rep_177_c_0 Rep_177_c_0_1850 2288322 2289047 - 3.A.1.122.14
TC Rep_177_c_0 Rep_177_c_0_1851 2289128 2290807 - 3.A.1.106.3
Gene ID: Rep_177_c_0_1844
Type: CAZyme
Location: 2278241 - 2281822 (-)
Gene ID: Rep_177_c_0_1845
Type:
Location: 2282208 - 2282528 (-)
Gene ID: Rep_177_c_0_1846
Type: CAZyme
Location: 2282634 - 2284295 (+)
Gene ID: Rep_177_c_0_1847
Type: pfam
Location: 2284517 - 2285632 (-)
Gene ID: Rep_177_c_0_1848
Type: TC
Location: 2285758 - 2287002 (-)
Gene ID: Rep_177_c_0_1849
Type: TC
Location: 2287049 - 2288311 (-)
Gene ID: Rep_177_c_0_1850
Type: TC
Location: 2288322 - 2289047 (-)
Gene ID: Rep_177_c_0_1851
Type: TC
Location: 2289128 - 2290807 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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