Cluster: Rep_177_CGC33
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_177
- CGC Family ID: CGCFAM_05971
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_177_c_0 | Rep_177_c_0_1869 | 2309248 | 2310183 | + | CBM50 |
| pfam | Rep_177_c_0 | Rep_177_c_0_1870 | 2310229 | 2310951 | + | PAP2 |
| CAZyme | Rep_177_c_0 | Rep_177_c_0_1871 | 2311141 | 2313840 | + | GH77 |
| peptidase | Rep_177_c_0 | Rep_177_c_0_1872 | 2313902 | 2314894 | + | M28.UPA |
| TC | Rep_177_c_0 | Rep_177_c_0_1873 | 2315066 | 2315641 | - | 2.A.51.1.6 |
| TC | Rep_177_c_0 | Rep_177_c_0_1874 | 2315638 | 2316183 | - | 2.A.51.1.6 |
| peptidase | Rep_177_c_0 | Rep_177_c_0_1875 | 2316372 | 2320301 | - | C56.972 |
| CAZyme | Rep_177_c_0 | Rep_177_c_0_1876 | 2321235 | 2322701 | - | GH32 |
| NULL(UNKNOWN) | Rep_177_c_0 | Rep_177_c_0_1877 | 2323096 | 2323341 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_177_c_0 | Rep_177_c_0_1878 | 2323375 | 2326980 | + | GH38 |
| pfam | Rep_177_c_0 | Rep_177_c_0_1879 | 2327209 | 2328084 | + | OmpA |
| TC | Rep_177_c_0 | Rep_177_c_0_1880 | 2328289 | 2329608 | + | 2.A.40.4.2 |
Gene ID: Rep_177_c_0_1869
Type: CAZyme
Location: 2309248 - 2310183 (+)
Type: CAZyme
Location: 2309248 - 2310183 (+)
Gene ID: Rep_177_c_0_1870
Type: pfam
Location: 2310229 - 2310951 (+)
Type: pfam
Location: 2310229 - 2310951 (+)
Gene ID: Rep_177_c_0_1871
Type: CAZyme
Location: 2311141 - 2313840 (+)
Type: CAZyme
Location: 2311141 - 2313840 (+)
Gene ID: Rep_177_c_0_1872
Type: peptidase
Location: 2313902 - 2314894 (+)
Type: peptidase
Location: 2313902 - 2314894 (+)
Gene ID: Rep_177_c_0_1873
Type: TC
Location: 2315066 - 2315641 (-)
Type: TC
Location: 2315066 - 2315641 (-)
Gene ID: Rep_177_c_0_1874
Type: TC
Location: 2315638 - 2316183 (-)
Type: TC
Location: 2315638 - 2316183 (-)
Gene ID: Rep_177_c_0_1875
Type: peptidase
Location: 2316372 - 2320301 (-)
Type: peptidase
Location: 2316372 - 2320301 (-)
Gene ID: Rep_177_c_0_1876
Type: CAZyme
Location: 2321235 - 2322701 (-)
Type: CAZyme
Location: 2321235 - 2322701 (-)
Gene ID: Rep_177_c_0_1877
Type:
Location: 2323096 - 2323341 (-)
Type:
Location: 2323096 - 2323341 (-)
Gene ID: Rep_177_c_0_1878
Type: CAZyme
Location: 2323375 - 2326980 (+)
Type: CAZyme
Location: 2323375 - 2326980 (+)
Gene ID: Rep_177_c_0_1879
Type: pfam
Location: 2327209 - 2328084 (+)
Type: pfam
Location: 2327209 - 2328084 (+)
Gene ID: Rep_177_c_0_1880
Type: TC
Location: 2328289 - 2329608 (+)
Type: TC
Location: 2328289 - 2329608 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella lascolaii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.