Genome Details
Selected Rep_genome_ID: MGYG000004589
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000004589 | 2,344,590 | 95.57% | 1.96% | France | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000004589_CGC24 | CGCFAM_00009 | Yes | 6 | 3 | |
| MGYG000004589_CGC18 | CGCFAM_00010 | Yes | 7 | 1 | alpha-glucan |
| MGYG000004589_CGC21 | CGCFAM_00046 | Yes | 6 | 1 | |
| MGYG000004589_CGC15 | CGCFAM_00051 | Yes | 5 | 2 | |
| MGYG000004589_CGC6 | CGCFAM_00149 | Yes | 4 | 1 | |
| MGYG000004589_CGC12 | CGCFAM_00220 | Yes | 7 | 1 | |
| MGYG000004589_CGC30 | CGCFAM_00247 | Yes | 4 | 2 | |
| MGYG000004589_CGC9 | CGCFAM_00706 | Yes | 12 | 1 | |
| MGYG000004589_CGC14 | CGCFAM_01186 | Yes | 6 | 1 | |
| MGYG000004589_CGC16 | CGCFAM_01499 | Yes | 8 | 2 | |
| MGYG000004589_CGC5 | CGCFAM_02176 | Yes | 4 | 2 | |
| MGYG000004589_CGC17 | CGCFAM_02678 | Yes | 11 | 1 | |
| MGYG000004589_CGC2 | CGCFAM_03211 | Yes | 4 | 1 | |
| MGYG000004589_CGC8 | CGCFAM_04699 | Yes | 7 | 1 | |
| MGYG000004589_CGC23 | CGCFAM_08953 | Yes | 5 | 1 | |
| MGYG000004589_CGC27 | CGCFAM_09048 | Yes | 4 | 1 | |
| MGYG000004589_CGC13 | CGCFAM_11028 | Yes | 8 | 2 | |
| MGYG000004589_CGC28 | CGCFAM_11029 | Yes | 3 | 1 |
Top CAZyme Families