Cluster: MGYG000004589_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004589
- CGC Family ID: CGCFAM_08953
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004589_58 | MGYG000004589_58_2 | 896 | 1783 | + | 3.A.1.1.42 |
| TC | MGYG000004589_58 | MGYG000004589_58_3 | 1783 | 2622 | + | 3.A.1.1.45 |
| pfam | MGYG000004589_58 | MGYG000004589_58_4 | 2820 | 4121 | + | SBP_bac_1 |
| CAZyme | MGYG000004589_58 | MGYG000004589_58_5 | 4338 | 6656 | + | GH31_3 |
| TC | MGYG000004589_58 | MGYG000004589_58_6 | 6925 | 7800 | + | 2.A.115.1.1 |
Gene ID: MGYG000004589_58_2
Type: TC
Location: 896 - 1783 (+)
Type: TC
Location: 896 - 1783 (+)
Gene ID: MGYG000004589_58_3
Type: TC
Location: 1783 - 2622 (+)
Type: TC
Location: 1783 - 2622 (+)
Gene ID: MGYG000004589_58_4
Type: pfam
Location: 2820 - 4121 (+)
Type: pfam
Location: 2820 - 4121 (+)
Gene ID: MGYG000004589_58_5
Type: CAZyme
Location: 4338 - 6656 (+)
Type: CAZyme
Location: 4338 - 6656 (+)
Gene ID: MGYG000004589_58_6
Type: TC
Location: 6925 - 7800 (+)
Type: TC
Location: 6925 - 7800 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.