Cluster: MGYG000004589_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000004589
- CGC Family ID: CGCFAM_00009
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004589_66 | MGYG000004589_66_1 | 3 | 545 | + | 3.A.1.104.1 |
| TC | MGYG000004589_66 | MGYG000004589_66_2 | 572 | 1921 | + | 3.A.1.103.6 |
| pfam | MGYG000004589_66 | MGYG000004589_66_3 | 1923 | 4136 | + | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 |
| CAZyme | MGYG000004589_66 | MGYG000004589_66_4 | 4133 | 6895 | + | GT2 |
| CAZyme | MGYG000004589_66 | MGYG000004589_66_5 | 6897 | 8543 | + | GT2 |
| CAZyme | MGYG000004589_66 | MGYG000004589_66_6 | 8552 | 10348 | + | GT2 |
Gene ID: MGYG000004589_66_1
Type: TC
Location: 3 - 545 (+)
Type: TC
Location: 3 - 545 (+)
Gene ID: MGYG000004589_66_2
Type: TC
Location: 572 - 1921 (+)
Type: TC
Location: 572 - 1921 (+)
Gene ID: MGYG000004589_66_3
Type: pfam
Location: 1923 - 4136 (+)
Type: pfam
Location: 1923 - 4136 (+)
Gene ID: MGYG000004589_66_4
Type: CAZyme
Location: 4133 - 6895 (+)
Type: CAZyme
Location: 4133 - 6895 (+)
Gene ID: MGYG000004589_66_5
Type: CAZyme
Location: 6897 - 8543 (+)
Type: CAZyme
Location: 6897 - 8543 (+)
Gene ID: MGYG000004589_66_6
Type: CAZyme
Location: 8552 - 10348 (+)
Type: CAZyme
Location: 8552 - 10348 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.