Cluster: MGYG000004589_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004589
- CGC Family ID: CGCFAM_11028
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004589_14 | MGYG000004589_14_11 | 6957 | 9686 | + | GH2 |
| TF | MGYG000004589_14 | MGYG000004589_14_12 | 9748 | 10818 | - | LacI |
| TC | MGYG000004589_14 | MGYG000004589_14_13 | 11190 | 12515 | + | 3.A.1.1.34 |
| TC | MGYG000004589_14 | MGYG000004589_14_14 | 12602 | 13507 | + | 3.A.1.1.34 |
| TC | MGYG000004589_14 | MGYG000004589_14_15 | 13511 | 14347 | + | 3.A.1.1.34 |
| CAZyme | MGYG000004589_14 | MGYG000004589_14_16 | 14419 | 15930 | + | GH51_1 |
| peptidase | MGYG000004589_14 | MGYG000004589_14_17 | 16057 | 17496 | - | M38.UNW |
| TC | MGYG000004589_14 | MGYG000004589_14_18 | 17743 | 19044 | + | 2.A.86.1.8 |
Gene ID: MGYG000004589_14_11
Type: CAZyme
Location: 6957 - 9686 (+)
Type: CAZyme
Location: 6957 - 9686 (+)
Gene ID: MGYG000004589_14_12
Type: TF
Location: 9748 - 10818 (-)
Type: TF
Location: 9748 - 10818 (-)
Gene ID: MGYG000004589_14_13
Type: TC
Location: 11190 - 12515 (+)
Type: TC
Location: 11190 - 12515 (+)
Gene ID: MGYG000004589_14_14
Type: TC
Location: 12602 - 13507 (+)
Type: TC
Location: 12602 - 13507 (+)
Gene ID: MGYG000004589_14_15
Type: TC
Location: 13511 - 14347 (+)
Type: TC
Location: 13511 - 14347 (+)
Gene ID: MGYG000004589_14_16
Type: CAZyme
Location: 14419 - 15930 (+)
Type: CAZyme
Location: 14419 - 15930 (+)
Gene ID: MGYG000004589_14_17
Type: peptidase
Location: 16057 - 17496 (-)
Type: peptidase
Location: 16057 - 17496 (-)
Gene ID: MGYG000004589_14_18
Type: TC
Location: 17743 - 19044 (+)
Type: TC
Location: 17743 - 19044 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.