Cluster: MGYG000004589_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004589
- CGC Family ID: CGCFAM_00046
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004589_43 | MGYG000004589_43_7 | 6505 | 8979 | - | GT35 |
| pfam | MGYG000004589_43 | MGYG000004589_43_8 | 8990 | 12325 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| pfam | MGYG000004589_43 | MGYG000004589_43_9 | 12519 | 13478 | + | RrnaAD |
| TC | MGYG000004589_43 | MGYG000004589_43_10 | 13640 | 14404 | + | 9.B.28.1.2 |
| TF | MGYG000004589_43 | MGYG000004589_43_11 | 14469 | 15125 | - | Crp |
| TC | MGYG000004589_43 | MGYG000004589_43_12 | 15171 | 15965 | - | 1.A.23.2.1 |
Gene ID: MGYG000004589_43_7
Type: CAZyme
Location: 6505 - 8979 (-)
Type: CAZyme
Location: 6505 - 8979 (-)
Gene ID: MGYG000004589_43_8
Type: pfam
Location: 8990 - 12325 (-)
Type: pfam
Location: 8990 - 12325 (-)
Gene ID: MGYG000004589_43_9
Type: pfam
Location: 12519 - 13478 (+)
Type: pfam
Location: 12519 - 13478 (+)
Gene ID: MGYG000004589_43_10
Type: TC
Location: 13640 - 14404 (+)
Type: TC
Location: 13640 - 14404 (+)
Gene ID: MGYG000004589_43_11
Type: TF
Location: 14469 - 15125 (-)
Type: TF
Location: 14469 - 15125 (-)
Gene ID: MGYG000004589_43_12
Type: TC
Location: 15171 - 15965 (-)
Type: TC
Location: 15171 - 15965 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.