Cluster: MGYG000004589_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004589
- CGC Family ID: CGCFAM_04699
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004589_4 | MGYG000004589_4_42 | 48247 | 49779 | + | 2.A.38.1.1 |
| STP | MGYG000004589_4 | MGYG000004589_4_43 | 49799 | 52768 | + | AAA |
| pfam | MGYG000004589_4 | MGYG000004589_4_44 | 53009 | 54307 | + | Bmp |
| TC | MGYG000004589_4 | MGYG000004589_4_45 | 54440 | 55939 | + | 3.A.1.2.12 |
| TC | MGYG000004589_4 | MGYG000004589_4_46 | 55936 | 57030 | + | 3.A.1.2.10 |
| TC | MGYG000004589_4 | MGYG000004589_4_47 | 57031 | 58029 | + | 3.A.1.2.17 |
| CAZyme | MGYG000004589_4 | MGYG000004589_4_48 | 58426 | 59439 | + | GH13_20 |
Gene ID: MGYG000004589_4_42
Type: TC
Location: 48247 - 49779 (+)
Type: TC
Location: 48247 - 49779 (+)
Gene ID: MGYG000004589_4_43
Type: STP
Location: 49799 - 52768 (+)
Type: STP
Location: 49799 - 52768 (+)
Gene ID: MGYG000004589_4_44
Type: pfam
Location: 53009 - 54307 (+)
Type: pfam
Location: 53009 - 54307 (+)
Gene ID: MGYG000004589_4_45
Type: TC
Location: 54440 - 55939 (+)
Type: TC
Location: 54440 - 55939 (+)
Gene ID: MGYG000004589_4_46
Type: TC
Location: 55936 - 57030 (+)
Type: TC
Location: 55936 - 57030 (+)
Gene ID: MGYG000004589_4_47
Type: TC
Location: 57031 - 58029 (+)
Type: TC
Location: 57031 - 58029 (+)
Gene ID: MGYG000004589_4_48
Type: CAZyme
Location: 58426 - 59439 (+)
Type: CAZyme
Location: 58426 - 59439 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.