Cluster: MGYG000004589_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004589
- CGC Family ID: CGCFAM_00220
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004589_8 | MGYG000004589_8_31 | 35090 | 36277 | + | 3.A.1.4.10 |
| TC | MGYG000004589_8 | MGYG000004589_8_32 | 36367 | 37248 | + | 3.A.1.4.10 |
| TC | MGYG000004589_8 | MGYG000004589_8_33 | 37258 | 38343 | + | 3.A.1.4.8 |
| TC | MGYG000004589_8 | MGYG000004589_8_34 | 38350 | 39120 | + | 3.A.1.4.10 |
| TC | MGYG000004589_8 | MGYG000004589_8_35 | 39120 | 39845 | + | 3.A.1.4.10 |
| pfam | MGYG000004589_8 | MGYG000004589_8_36 | 40031 | 41239 | + | GARS_A | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | ATP-grasp_4 | LAL_C2 |
| CAZyme | MGYG000004589_8 | MGYG000004589_8_37 | 41248 | 42240 | + | GT2 |
Gene ID: MGYG000004589_8_31
Type: TC
Location: 35090 - 36277 (+)
Type: TC
Location: 35090 - 36277 (+)
Gene ID: MGYG000004589_8_32
Type: TC
Location: 36367 - 37248 (+)
Type: TC
Location: 36367 - 37248 (+)
Gene ID: MGYG000004589_8_33
Type: TC
Location: 37258 - 38343 (+)
Type: TC
Location: 37258 - 38343 (+)
Gene ID: MGYG000004589_8_34
Type: TC
Location: 38350 - 39120 (+)
Type: TC
Location: 38350 - 39120 (+)
Gene ID: MGYG000004589_8_35
Type: TC
Location: 39120 - 39845 (+)
Type: TC
Location: 39120 - 39845 (+)
Gene ID: MGYG000004589_8_36
Type: pfam
Location: 40031 - 41239 (+)
Type: pfam
Location: 40031 - 41239 (+)
Gene ID: MGYG000004589_8_37
Type: CAZyme
Location: 41248 - 42240 (+)
Type: CAZyme
Location: 41248 - 42240 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.