Cluster: MGYG000004589_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000004589
- CGC Family ID: CGCFAM_00051
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000004589_18 | MGYG000004589_18_15 | 14181 | 17129 | - | GH3 |
| CAZyme | MGYG000004589_18 | MGYG000004589_18_16 | 17354 | 20698 | - | GH3 |
| NULL(UNKNOWN) | MGYG000004589_18 | MGYG000004589_18_17 | 20695 | 20922 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000004589_18 | MGYG000004589_18_18 | 20930 | 22276 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000004589_18 | MGYG000004589_18_19 | 22322 | 23875 | - | 8.A.59.2.1 |
Gene ID: MGYG000004589_18_15
Type: CAZyme
Location: 14181 - 17129 (-)
Type: CAZyme
Location: 14181 - 17129 (-)
Gene ID: MGYG000004589_18_16
Type: CAZyme
Location: 17354 - 20698 (-)
Type: CAZyme
Location: 17354 - 20698 (-)
Gene ID: MGYG000004589_18_17
Type:
Location: 20695 - 20922 (-)
Type:
Location: 20695 - 20922 (-)
Gene ID: MGYG000004589_18_18
Type: TF
Location: 20930 - 22276 (-)
Type: TF
Location: 20930 - 22276 (-)
Gene ID: MGYG000004589_18_19
Type: TC
Location: 22322 - 23875 (-)
Type: TC
Location: 22322 - 23875 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.