Cluster: MGYG000004589_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000004589
- CGC Family ID: CGCFAM_01186
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000004589_17 | MGYG000004589_17_19 | 12522 | 13367 | + | 3.A.1.149.1 |
| pfam | MGYG000004589_17 | MGYG000004589_17_20 | 13364 | 13990 | + | ABC2_membrane_5 |
| TC | MGYG000004589_17 | MGYG000004589_17_21 | 14395 | 15663 | + | 3.A.1.1.3 |
| TC | MGYG000004589_17 | MGYG000004589_17_22 | 15797 | 16762 | + | 3.A.1.1.36 |
| TC | MGYG000004589_17 | MGYG000004589_17_23 | 16759 | 17580 | + | 3.A.1.1.36 |
| CAZyme | MGYG000004589_17 | MGYG000004589_17_24 | 17590 | 19098 | + | GH51_1 |
Gene ID: MGYG000004589_17_19
Type: TC
Location: 12522 - 13367 (+)
Type: TC
Location: 12522 - 13367 (+)
Gene ID: MGYG000004589_17_20
Type: pfam
Location: 13364 - 13990 (+)
Type: pfam
Location: 13364 - 13990 (+)
Gene ID: MGYG000004589_17_21
Type: TC
Location: 14395 - 15663 (+)
Type: TC
Location: 14395 - 15663 (+)
Gene ID: MGYG000004589_17_22
Type: TC
Location: 15797 - 16762 (+)
Type: TC
Location: 15797 - 16762 (+)
Gene ID: MGYG000004589_17_23
Type: TC
Location: 16759 - 17580 (+)
Type: TC
Location: 16759 - 17580 (+)
Gene ID: MGYG000004589_17_24
Type: CAZyme
Location: 17590 - 19098 (+)
Type: CAZyme
Location: 17590 - 19098 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Porcincola
Species
Porcincola intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.