Genome Details
Selected Rep_genome_ID: MGYG000000303
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR011984 | 2,120,778 | 98.58% | 0.59% | China | Asia | CGMR |
| MGYG000000303 | 2,213,433 | 99.53% | 0.59% | Sweden | Europe | UHGG |
| ShaoY_2019_ERR3406263_bin.2 | 2,121,872 | 99.05% | 0.592% | UK | Europe | ELGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000000303_CGC11 | CGCFAM_00691 | Yes | 6 | 2 | |
| MGYG000000303_CGC18 | CGCFAM_00914 | Yes | 3 | 1 | |
| MGYG000000303_CGC4 | CGCFAM_01719 | Yes | 7 | 1 | |
| MGYG000000303_CGC16 | CGCFAM_02488 | Yes | 8 | 1 | |
| MGYG000000303_CGC9 | CGCFAM_02666 | Yes | 9 | 1 | |
| MGYG000000303_CGC7 | CGCFAM_02705 | Yes | 21 | 2 | |
| MGYG000000303_CGC15 | CGCFAM_03530 | Yes | 3 | 1 | |
| MGYG000000303_CGC5 | CGCFAM_03615 | Yes | 12 | 1 | |
| MGYG000000303_CGC17 | CGCFAM_07870 | Yes | 10 | 1 |
Top CAZyme Families