Cluster: MGYG000000303_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000303
- CGC Family ID: CGCFAM_03530
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000303_14 | MGYG000000303_14_1 | 3 | 794 | + | GH77 |
| pfam | MGYG000000303_14 | MGYG000000303_14_2 | 821 | 1561 | - | Hydrolase | HAD_2 |
| TC | MGYG000000303_14 | MGYG000000303_14_3 | 1574 | 1804 | - | 4.A.1.1.5 |
Gene ID: MGYG000000303_14_1
Type: CAZyme
Location: 3 - 794 (+)
Type: CAZyme
Location: 3 - 794 (+)
Gene ID: MGYG000000303_14_2
Type: pfam
Location: 821 - 1561 (-)
Type: pfam
Location: 821 - 1561 (-)
Gene ID: MGYG000000303_14_3
Type: TC
Location: 1574 - 1804 (-)
Type: TC
Location: 1574 - 1804 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.