Cluster: MGYG000000303_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000303
- CGC Family ID: CGCFAM_02488
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000303_18 | MGYG000000303_18_19 | 21698 | 24259 | + | 2.A.6.5.5 |
| pfam | MGYG000000303_18 | MGYG000000303_18_20 | 24299 | 25624 | - | DnaB | DnaB_C | AAA_25 |
| TC | MGYG000000303_18 | MGYG000000303_18_21 | 25859 | 27172 | + | 2.A.66.1.28 |
| pfam | MGYG000000303_18 | MGYG000000303_18_22 | 27303 | 27764 | - | Ribosomal_L9_N | Ribosomal_L9_C |
| pfam | MGYG000000303_18 | MGYG000000303_18_23 | 27780 | 28022 | - | Ribosomal_S18 |
| TC | MGYG000000303_18 | MGYG000000303_18_24 | 28067 | 28642 | - | 3.A.7.19.1 |
| pfam | MGYG000000303_18 | MGYG000000303_18_25 | 28663 | 28947 | - | Ribosomal_S6 |
| CAZyme | MGYG000000303_18 | MGYG000000303_18_26 | 29182 | 31623 | - | GT51 |
Gene ID: MGYG000000303_18_19
Type: TC
Location: 21698 - 24259 (+)
Type: TC
Location: 21698 - 24259 (+)
Gene ID: MGYG000000303_18_20
Type: pfam
Location: 24299 - 25624 (-)
Type: pfam
Location: 24299 - 25624 (-)
Gene ID: MGYG000000303_18_21
Type: TC
Location: 25859 - 27172 (+)
Type: TC
Location: 25859 - 27172 (+)
Gene ID: MGYG000000303_18_22
Type: pfam
Location: 27303 - 27764 (-)
Type: pfam
Location: 27303 - 27764 (-)
Gene ID: MGYG000000303_18_23
Type: pfam
Location: 27780 - 28022 (-)
Type: pfam
Location: 27780 - 28022 (-)
Gene ID: MGYG000000303_18_24
Type: TC
Location: 28067 - 28642 (-)
Type: TC
Location: 28067 - 28642 (-)
Gene ID: MGYG000000303_18_25
Type: pfam
Location: 28663 - 28947 (-)
Type: pfam
Location: 28663 - 28947 (-)
Gene ID: MGYG000000303_18_26
Type: CAZyme
Location: 29182 - 31623 (-)
Type: CAZyme
Location: 29182 - 31623 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.