Cluster: MGYG000000303_CGC9
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000303
- CGC Family ID: CGCFAM_02666
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000303_5 | MGYG000000303_5_17 | 25898 | 27484 | + | 2.A.81.1.3 |
| pfam | MGYG000000303_5 | MGYG000000303_5_18 | 27505 | 28494 | - | CTP_transf_like | Flavokinase | FAD_syn |
| NULL(UNKNOWN) | MGYG000000303_5 | MGYG000000303_5_19 | 28498 | 28650 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000303_5 | MGYG000000303_5_20 | 28918 | 30285 | - | GH4 |
| TF | MGYG000000303_5 | MGYG000000303_5_21 | 30282 | 31019 | - | HTH_DeoR |
| STP | MGYG000000303_5 | MGYG000000303_5_22 | 31099 | 32031 | + | PfkB |
| TC | MGYG000000303_5 | MGYG000000303_5_23 | 32058 | 33416 | + | 3.A.1.1.24 |
| TC | MGYG000000303_5 | MGYG000000303_5_24 | 33490 | 34383 | + | 3.A.1.1.37 |
| TC | MGYG000000303_5 | MGYG000000303_5_25 | 34386 | 35192 | + | 3.A.1.1.24 |
Gene ID: MGYG000000303_5_17
Type: TC
Location: 25898 - 27484 (+)
Type: TC
Location: 25898 - 27484 (+)
Gene ID: MGYG000000303_5_18
Type: pfam
Location: 27505 - 28494 (-)
Type: pfam
Location: 27505 - 28494 (-)
Gene ID: MGYG000000303_5_19
Type:
Location: 28498 - 28650 (-)
Type:
Location: 28498 - 28650 (-)
Gene ID: MGYG000000303_5_20
Type: CAZyme
Location: 28918 - 30285 (-)
Type: CAZyme
Location: 28918 - 30285 (-)
Gene ID: MGYG000000303_5_21
Type: TF
Location: 30282 - 31019 (-)
Type: TF
Location: 30282 - 31019 (-)
Gene ID: MGYG000000303_5_22
Type: STP
Location: 31099 - 32031 (+)
Type: STP
Location: 31099 - 32031 (+)
Gene ID: MGYG000000303_5_23
Type: TC
Location: 32058 - 33416 (+)
Type: TC
Location: 32058 - 33416 (+)
Gene ID: MGYG000000303_5_24
Type: TC
Location: 33490 - 34383 (+)
Type: TC
Location: 33490 - 34383 (+)
Gene ID: MGYG000000303_5_25
Type: TC
Location: 34386 - 35192 (+)
Type: TC
Location: 34386 - 35192 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.