Cluster: MGYG000000303_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000303
- CGC Family ID: CGCFAM_00914
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000303_20 | MGYG000000303_20_26 | 22702 | 23886 | - | GH109 |
| TF | MGYG000000303_20 | MGYG000000303_20_27 | 24127 | 25143 | + | LacI |
| TC | MGYG000000303_20 | MGYG000000303_20_28 | 25347 | 27008 | - | 2.A.1.1.26 |
Gene ID: MGYG000000303_20_26
Type: CAZyme
Location: 22702 - 23886 (-)
Type: CAZyme
Location: 22702 - 23886 (-)
Gene ID: MGYG000000303_20_27
Type: TF
Location: 24127 - 25143 (+)
Type: TF
Location: 24127 - 25143 (+)
Gene ID: MGYG000000303_20_28
Type: TC
Location: 25347 - 27008 (-)
Type: TC
Location: 25347 - 27008 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum cambriense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.