Genome Details
Selected Rep_genome_ID: HRGMv2_4234
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4234 | 2,880,364 | 93.86% | 0.316% | South Korea | Asia | HRGM |
| SW180_15_sub | 2,671,738 | 91.36% | 1.74% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4234_CGC17 | CGCFAM_00007 | Yes | 9 | 5 | |
| HRGMv2_4234_CGC30 | CGCFAM_00009 | Yes | 4 | 1 | |
| HRGMv2_4234_CGC28 | CGCFAM_00364 | Yes | 4 | 1 | |
| HRGMv2_4234_CGC7 | CGCFAM_00528 | Yes | 3 | 1 | |
| HRGMv2_4234_CGC18 | CGCFAM_00624 | Yes | 3 | 1 | |
| HRGMv2_4234_CGC22 | CGCFAM_00660 | Yes | 4 | 1 | |
| HRGMv2_4234_CGC5 | CGCFAM_03475 | Yes | 8 | 2 | |
| HRGMv2_4234_CGC10 | CGCFAM_04620 | Yes | 8 | 5 | |
| HRGMv2_4234_CGC1 | CGCFAM_05209 | Yes | 6 | 3 | |
| HRGMv2_4234_CGC2 | CGCFAM_06275 | Yes | 3 | 2 | |
| HRGMv2_4234_CGC8 | CGCFAM_06276 | Yes | 7 | 2 | |
| HRGMv2_4234_CGC13 | CGCFAM_08173 | Yes | 3 | 1 |
Top CAZyme Families