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Cluster: HRGMv2_4234_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4234_14 HRGMv2_4234_14_28 21651 22943 - GT4
TC HRGMv2_4234_14 HRGMv2_4234_14_29 22933 24492 - 2.A.66.1.40
CAZyme HRGMv2_4234_14 HRGMv2_4234_14_30 24566 25414 - GT32
pfam HRGMv2_4234_14 HRGMv2_4234_14_31 25430 26833 - O-ag_pol_Wzy
CAZyme HRGMv2_4234_14 HRGMv2_4234_14_32 26899 28050 - GT4
CAZyme HRGMv2_4234_14 HRGMv2_4234_14_33 28047 29228 - GT4
CAZyme HRGMv2_4234_14 HRGMv2_4234_14_34 29253 32309 - GT4
TC HRGMv2_4234_14 HRGMv2_4234_14_35 32349 34394 - 9.B.18.2.1
Gene ID: HRGMv2_4234_14_28
Type: CAZyme
Location: 21651 - 22943 (-)
Gene ID: HRGMv2_4234_14_29
Type: TC
Location: 22933 - 24492 (-)
Gene ID: HRGMv2_4234_14_30
Type: CAZyme
Location: 24566 - 25414 (-)
Gene ID: HRGMv2_4234_14_31
Type: pfam
Location: 25430 - 26833 (-)
Gene ID: HRGMv2_4234_14_32
Type: CAZyme
Location: 26899 - 28050 (-)
Gene ID: HRGMv2_4234_14_33
Type: CAZyme
Location: 28047 - 29228 (-)
Gene ID: HRGMv2_4234_14_34
Type: CAZyme
Location: 29253 - 32309 (-)
Gene ID: HRGMv2_4234_14_35
Type: TC
Location: 32349 - 34394 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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