Cluster: HRGMv2_4234_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4234
- CGC Family ID: CGCFAM_05209
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4234_1 | HRGMv2_4234_1_27 | 34688 | 36373 | - | GH18 |
| NULL(UNKNOWN) | HRGMv2_4234_1 | HRGMv2_4234_1_28 | 36513 | 36791 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4234_1 | HRGMv2_4234_1_29 | 37092 | 40673 | - | GH20 |
| NULL(UNKNOWN) | HRGMv2_4234_1 | HRGMv2_4234_1_30 | 40860 | 41150 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4234_1 | HRGMv2_4234_1_31 | 41155 | 45591 | - | CBM32 | GH20 |
| TC | HRGMv2_4234_1 | HRGMv2_4234_1_32 | 45777 | 46304 | + | 9.B.156.3.1 |
Gene ID: HRGMv2_4234_1_27
Type: CAZyme
Location: 34688 - 36373 (-)
Type: CAZyme
Location: 34688 - 36373 (-)
Gene ID: HRGMv2_4234_1_28
Type:
Location: 36513 - 36791 (-)
Type:
Location: 36513 - 36791 (-)
Gene ID: HRGMv2_4234_1_29
Type: CAZyme
Location: 37092 - 40673 (-)
Type: CAZyme
Location: 37092 - 40673 (-)
Gene ID: HRGMv2_4234_1_30
Type:
Location: 40860 - 41150 (-)
Type:
Location: 40860 - 41150 (-)
Gene ID: HRGMv2_4234_1_31
Type: CAZyme
Location: 41155 - 45591 (-)
Type: CAZyme
Location: 41155 - 45591 (-)
Gene ID: HRGMv2_4234_1_32
Type: TC
Location: 45777 - 46304 (+)
Type: TC
Location: 45777 - 46304 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.