Cluster: HRGMv2_4234_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- CGC Family ID: CGCFAM_00660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4234_75 | HRGMv2_4234_75_1 | 3 | 1619 | + | GT2 |
| pfam | HRGMv2_4234_75 | HRGMv2_4234_75_2 | 1609 | 2880 | + | PS_pyruv_trans |
| pfam | HRGMv2_4234_75 | HRGMv2_4234_75_3 | 2890 | 3990 | + | GLF | NAD_binding_8 |
| TC | HRGMv2_4234_75 | HRGMv2_4234_75_4 | 4003 | 5190 | + | 3.D.9.1.1 |
Gene ID: HRGMv2_4234_75_1
Type: CAZyme
Location: 3 - 1619 (+)
Type: CAZyme
Location: 3 - 1619 (+)
Gene ID: HRGMv2_4234_75_2
Type: pfam
Location: 1609 - 2880 (+)
Type: pfam
Location: 1609 - 2880 (+)
Gene ID: HRGMv2_4234_75_3
Type: pfam
Location: 2890 - 3990 (+)
Type: pfam
Location: 2890 - 3990 (+)
Gene ID: HRGMv2_4234_75_4
Type: TC
Location: 4003 - 5190 (+)
Type: TC
Location: 4003 - 5190 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.