Cluster: HRGMv2_4234_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4234_117 | HRGMv2_4234_117_4 | 3854 | 4651 | + | 3.A.1.104.1 |
| TC | HRGMv2_4234_117 | HRGMv2_4234_117_5 | 4724 | 5995 | + | 3.A.1.103.6 |
| pfam | HRGMv2_4234_117 | HRGMv2_4234_117_6 | 6005 | 8062 | + | RrnaAD | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 |
| CAZyme | HRGMv2_4234_117 | HRGMv2_4234_117_7 | 8089 | 9312 | + | GT2 |
Gene ID: HRGMv2_4234_117_4
Type: TC
Location: 3854 - 4651 (+)
Type: TC
Location: 3854 - 4651 (+)
Gene ID: HRGMv2_4234_117_5
Type: TC
Location: 4724 - 5995 (+)
Type: TC
Location: 4724 - 5995 (+)
Gene ID: HRGMv2_4234_117_6
Type: pfam
Location: 6005 - 8062 (+)
Type: pfam
Location: 6005 - 8062 (+)
Gene ID: HRGMv2_4234_117_7
Type: CAZyme
Location: 8089 - 9312 (+)
Type: CAZyme
Location: 8089 - 9312 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.