Cluster: HRGMv2_4234_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4234
- CGC Family ID: CGCFAM_00364
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4234_101 | HRGMv2_4234_101_3 | 2897 | 4606 | + | 8.A.59.2.1 |
| TF | HRGMv2_4234_101 | HRGMv2_4234_101_4 | 4610 | 5368 | + | HTH_AraC |
| sulfatase | HRGMv2_4234_101 | HRGMv2_4234_101_5 | 5448 | 6797 | + | S1_19 |
| CAZyme | HRGMv2_4234_101 | HRGMv2_4234_101_6 | 6815 | 11035 | + | CBM51 | GH2 |
Gene ID: HRGMv2_4234_101_3
Type: TC
Location: 2897 - 4606 (+)
Type: TC
Location: 2897 - 4606 (+)
Gene ID: HRGMv2_4234_101_4
Type: TF
Location: 4610 - 5368 (+)
Type: TF
Location: 4610 - 5368 (+)
Gene ID: HRGMv2_4234_101_5
Type: sulfatase
Location: 5448 - 6797 (+)
Type: sulfatase
Location: 5448 - 6797 (+)
Gene ID: HRGMv2_4234_101_6
Type: CAZyme
Location: 6815 - 11035 (+)
Type: CAZyme
Location: 6815 - 11035 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Hominisplanchenecus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.