Genome Details
Selected Rep_genome_ID: HRGMv2_4043
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4043 | 1,865,788 | 92.71% | 1.235% | Italy(Sardinia) | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4043_CGC11 | CGCFAM_00233 | Yes | 7 | 2 | |
| HRGMv2_4043_CGC1 | CGCFAM_00268 | Yes | 5 | 1 | |
| HRGMv2_4043_CGC6 | CGCFAM_00703 | Yes | 4 | 1 | |
| HRGMv2_4043_CGC8 | CGCFAM_01579 | Yes | 6 | 2 | |
| HRGMv2_4043_CGC18 | CGCFAM_01947 | Yes | 5 | 3 | |
| HRGMv2_4043_CGC3 | CGCFAM_02526 | Yes | 4 | 1 | |
| HRGMv2_4043_CGC12 | CGCFAM_05441 | Yes | 6 | 3 | |
| HRGMv2_4043_CGC10 | CGCFAM_06029 | Yes | 5 | 2 |
Top CAZyme Families