Cluster: HRGMv2_4043_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4043
- CGC Family ID: CGCFAM_00703
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4043_4 | HRGMv2_4043_4_104 | 124304 | 125161 | - | 3.A.1.132.3 |
| STP | HRGMv2_4043_4 | HRGMv2_4043_4_105 | 125288 | 126640 | - | PALP |
| pfam | HRGMv2_4043_4 | HRGMv2_4043_4_106 | 127056 | 127874 | - | Acyltransferase |
| CAZyme | HRGMv2_4043_4 | HRGMv2_4043_4_107 | 127871 | 129055 | - | GT4 |
Gene ID: HRGMv2_4043_4_104
Type: TC
Location: 124304 - 125161 (-)
Type: TC
Location: 124304 - 125161 (-)
Gene ID: HRGMv2_4043_4_105
Type: STP
Location: 125288 - 126640 (-)
Type: STP
Location: 125288 - 126640 (-)
Gene ID: HRGMv2_4043_4_106
Type: pfam
Location: 127056 - 127874 (-)
Type: pfam
Location: 127056 - 127874 (-)
Gene ID: HRGMv2_4043_4_107
Type: CAZyme
Location: 127871 - 129055 (-)
Type: CAZyme
Location: 127871 - 129055 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.