Cluster: HRGMv2_4043_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4043
- CGC Family ID: CGCFAM_01947
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4043_25 | HRGMv2_4043_25_1 | 93 | 2948 | - | GH3 |
| CAZyme | HRGMv2_4043_25 | HRGMv2_4043_25_2 | 3037 | 6030 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_4043_25 | HRGMv2_4043_25_3 | 6027 | 6470 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4043_25 | HRGMv2_4043_25_4 | 6482 | 8542 | - | 1.C.39.4.6 |
| CAZyme | HRGMv2_4043_25 | HRGMv2_4043_25_5 | 8675 | 13030 | - | GH3 |
Gene ID: HRGMv2_4043_25_1
Type: CAZyme
Location: 93 - 2948 (-)
Type: CAZyme
Location: 93 - 2948 (-)
Gene ID: HRGMv2_4043_25_2
Type: CAZyme
Location: 3037 - 6030 (-)
Type: CAZyme
Location: 3037 - 6030 (-)
Gene ID: HRGMv2_4043_25_3
Type:
Location: 6027 - 6470 (-)
Type:
Location: 6027 - 6470 (-)
Gene ID: HRGMv2_4043_25_4
Type: TC
Location: 6482 - 8542 (-)
Type: TC
Location: 6482 - 8542 (-)
Gene ID: HRGMv2_4043_25_5
Type: CAZyme
Location: 8675 - 13030 (-)
Type: CAZyme
Location: 8675 - 13030 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.