Cluster: HRGMv2_4043_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4043
- CGC Family ID: CGCFAM_01579
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4043_5 | HRGMv2_4043_5_56 | 65786 | 67519 | + | 3.A.2.1.5 |
| TC | HRGMv2_4043_5 | HRGMv2_4043_5_57 | 67531 | 68427 | + | 3.A.2.1.5 |
| TC | HRGMv2_4043_5 | HRGMv2_4043_5_58 | 68427 | 69836 | + | 3.A.2.1.5 |
| pfam | HRGMv2_4043_5 | HRGMv2_4043_5_59 | 69846 | 70256 | + | ATP-synt_DE | ATP-synt_DE_N |
| CAZyme | HRGMv2_4043_5 | HRGMv2_4043_5_60 | 70884 | 72833 | + | GH13_9 |
| CAZyme | HRGMv2_4043_5 | HRGMv2_4043_5_61 | 72854 | 74371 | + | GT5 |
Gene ID: HRGMv2_4043_5_56
Type: TC
Location: 65786 - 67519 (+)
Type: TC
Location: 65786 - 67519 (+)
Gene ID: HRGMv2_4043_5_57
Type: TC
Location: 67531 - 68427 (+)
Type: TC
Location: 67531 - 68427 (+)
Gene ID: HRGMv2_4043_5_58
Type: TC
Location: 68427 - 69836 (+)
Type: TC
Location: 68427 - 69836 (+)
Gene ID: HRGMv2_4043_5_59
Type: pfam
Location: 69846 - 70256 (+)
Type: pfam
Location: 69846 - 70256 (+)
Gene ID: HRGMv2_4043_5_60
Type: CAZyme
Location: 70884 - 72833 (+)
Type: CAZyme
Location: 70884 - 72833 (+)
Gene ID: HRGMv2_4043_5_61
Type: CAZyme
Location: 72854 - 74371 (+)
Type: CAZyme
Location: 72854 - 74371 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.