Cluster: HRGMv2_4043_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4043
- CGC Family ID: CGCFAM_02526
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4043_1 | HRGMv2_4043_1_249 | 277070 | 279277 | - | 3.A.7.16.1 |
| NULL(UNKNOWN) | HRGMv2_4043_1 | HRGMv2_4043_1_250 | 279755 | 279934 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4043_1 | HRGMv2_4043_1_251 | 279946 | 283251 | - | Fer4 | Fer4 |
| CAZyme | HRGMv2_4043_1 | HRGMv2_4043_1_252 | 283257 | 285932 | - | GT2 |
Gene ID: HRGMv2_4043_1_249
Type: TC
Location: 277070 - 279277 (-)
Type: TC
Location: 277070 - 279277 (-)
Gene ID: HRGMv2_4043_1_250
Type:
Location: 279755 - 279934 (-)
Type:
Location: 279755 - 279934 (-)
Gene ID: HRGMv2_4043_1_251
Type: STP
Location: 279946 - 283251 (-)
Type: STP
Location: 279946 - 283251 (-)
Gene ID: HRGMv2_4043_1_252
Type: CAZyme
Location: 283257 - 285932 (-)
Type: CAZyme
Location: 283257 - 285932 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.