Cluster: HRGMv2_4043_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4043
- CGC Family ID: CGCFAM_06029
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4043_8 | HRGMv2_4043_8_10 | 15425 | 18346 | - | GH3 |
| pfam | HRGMv2_4043_8 | HRGMv2_4043_8_11 | 18346 | 19860 | - | Big_3 | Flg_new | Flg_new |
| CAZyme | HRGMv2_4043_8 | HRGMv2_4043_8_12 | 19991 | 23812 | - | GH3 |
| pfam | HRGMv2_4043_8 | HRGMv2_4043_8_13 | 24327 | 25184 | - | Zn_dep_PLPC |
| TC | HRGMv2_4043_8 | HRGMv2_4043_8_14 | 25197 | 27806 | - | 3.A.3.23.2 |
Gene ID: HRGMv2_4043_8_10
Type: CAZyme
Location: 15425 - 18346 (-)
Type: CAZyme
Location: 15425 - 18346 (-)
Gene ID: HRGMv2_4043_8_11
Type: pfam
Location: 18346 - 19860 (-)
Type: pfam
Location: 18346 - 19860 (-)
Gene ID: HRGMv2_4043_8_12
Type: CAZyme
Location: 19991 - 23812 (-)
Type: CAZyme
Location: 19991 - 23812 (-)
Gene ID: HRGMv2_4043_8_13
Type: pfam
Location: 24327 - 25184 (-)
Type: pfam
Location: 24327 - 25184 (-)
Gene ID: HRGMv2_4043_8_14
Type: TC
Location: 25197 - 27806 (-)
Type: TC
Location: 25197 - 27806 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium sp900761765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.