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Genome Details

Selected Rep_genome_ID: HRGMv2_3994
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900553465
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_3994 2,861,914 93.11% 0.689% NA Europe HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_3994_CGC5 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3994_CGC33 CGCFAM_00003 Yes 5 2
HRGMv2_3994_CGC10 CGCFAM_00013 Yes 6 1
HRGMv2_3994_CGC9 CGCFAM_00048 Yes 11 4
HRGMv2_3994_CGC13 CGCFAM_00183 Yes 8 3 pectin/host glycan
HRGMv2_3994_CGC7 CGCFAM_00183 Yes 4 1 pectin/host glycan
HRGMv2_3994_CGC42 CGCFAM_00321 Yes 6 3
HRGMv2_3994_CGC27 CGCFAM_00445 Yes 4 2
HRGMv2_3994_CGC16 CGCFAM_00648 Yes 3 1
HRGMv2_3994_CGC18 CGCFAM_00820 Yes 6 2 beta-glucan
HRGMv2_3994_CGC15 CGCFAM_00837 Yes 6 2
HRGMv2_3994_CGC21 CGCFAM_01047 Yes 6 1
HRGMv2_3994_CGC3 CGCFAM_01339 Yes 4 1
HRGMv2_3994_CGC1 CGCFAM_01780 Yes 4 1
HRGMv2_3994_CGC28 CGCFAM_01981 Yes 5 2
HRGMv2_3994_CGC35 CGCFAM_02091 Yes 6 3
HRGMv2_3994_CGC20 CGCFAM_02386 Yes 7 2
HRGMv2_3994_CGC22 CGCFAM_03986 Yes 3 1
HRGMv2_3994_CGC41 CGCFAM_05031 Yes 10 1
HRGMv2_3994_CGC19 CGCFAM_05820 Yes 4 1
HRGMv2_3994_CGC6 CGCFAM_05971 Yes 6 2
HRGMv2_3994_CGC36 CGCFAM_06945 Yes 8 3
HRGMv2_3994_CGC25 CGCFAM_06947 Yes 8 3
HRGMv2_3994_CGC34 CGCFAM_07364 Yes 3 2
HRGMv2_3994_CGC8 CGCFAM_09579 Yes 8 1
Top CAZyme Families