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Cluster: HRGMv2_3994_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3994_75 HRGMv2_3994_75_1 542 2491 - GH146
pfam HRGMv2_3994_75 HRGMv2_3994_75_2 2743 3822 - BT_3987-like_N | BT_3044-like_C | DUF4973
pfam HRGMv2_3994_75 HRGMv2_3994_75_3 3844 5940 - SusD_RagB | SusD-like_3
TC HRGMv2_3994_75 HRGMv2_3994_75_4 5954 9073 - 1.B.14.6.1
pfam HRGMv2_3994_75 HRGMv2_3994_75_5 9085 10680 - TIG
sulfatase HRGMv2_3994_75 HRGMv2_3994_75_6 10874 13372 - S1_4
CAZyme HRGMv2_3994_75 HRGMv2_3994_75_7 13960 15420 - GH125
CAZyme HRGMv2_3994_75 HRGMv2_3994_75_8 15479 16645 - GH76
Gene ID: HRGMv2_3994_75_1
Type: CAZyme
Location: 542 - 2491 (-)
Gene ID: HRGMv2_3994_75_2
Type: pfam
Location: 2743 - 3822 (-)
Gene ID: HRGMv2_3994_75_3
Type: pfam
Location: 3844 - 5940 (-)
Gene ID: HRGMv2_3994_75_4
Type: TC
Location: 5954 - 9073 (-)
Gene ID: HRGMv2_3994_75_5
Type: pfam
Location: 9085 - 10680 (-)
Gene ID: HRGMv2_3994_75_6
Type: sulfatase
Location: 10874 - 13372 (-)
Gene ID: HRGMv2_3994_75_7
Type: CAZyme
Location: 13960 - 15420 (-)
Gene ID: HRGMv2_3994_75_8
Type: CAZyme
Location: 15479 - 16645 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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