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Cluster: HRGMv2_3994_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3994_44 HRGMv2_3994_44_15 21280 23928 + 3.A.3.4.1
pfam HRGMv2_3994_44 HRGMv2_3994_44_16 23945 24988 + OprB
TC HRGMv2_3994_44 HRGMv2_3994_44_17 25053 26915 + 3.A.3.6.5
TF HRGMv2_3994_44 HRGMv2_3994_44_18 26997 27425 + FUR
NULL(UNKNOWN) HRGMv2_3994_44 HRGMv2_3994_44_19 27377 27586 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3994_44 HRGMv2_3994_44_20 28097 29293 - CE1
pfam HRGMv2_3994_44 HRGMv2_3994_44_21 29346 30335 - Dus
TC HRGMv2_3994_44 HRGMv2_3994_44_22 30347 31477 - 3.A.11.1.3
Gene ID: HRGMv2_3994_44_15
Type: TC
Location: 21280 - 23928 (+)
Gene ID: HRGMv2_3994_44_16
Type: pfam
Location: 23945 - 24988 (+)
Gene ID: HRGMv2_3994_44_17
Type: TC
Location: 25053 - 26915 (+)
Gene ID: HRGMv2_3994_44_18
Type: TF
Location: 26997 - 27425 (+)
Gene ID: HRGMv2_3994_44_19
Type:
Location: 27377 - 27586 (-)
Gene ID: HRGMv2_3994_44_20
Type: CAZyme
Location: 28097 - 29293 (-)
Gene ID: HRGMv2_3994_44_21
Type: pfam
Location: 29346 - 30335 (-)
Gene ID: HRGMv2_3994_44_22
Type: TC
Location: 30347 - 31477 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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