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Cluster: HRGMv2_3994_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3994_120 HRGMv2_3994_120_5 3167 4846 + 3.A.1.106.12
TC HRGMv2_3994_120 HRGMv2_3994_120_6 4927 5652 + 3.A.1.122.2
TC HRGMv2_3994_120 HRGMv2_3994_120_7 5663 6925 + 3.A.1.122.2
TC HRGMv2_3994_120 HRGMv2_3994_120_8 6972 8216 + 3.A.1.122.2
pfam HRGMv2_3994_120 HRGMv2_3994_120_9 8320 9435 + HlyD_3 | HlyD_D23
CAZyme HRGMv2_3994_120 HRGMv2_3994_120_10 9651 11318 - GH32
CAZyme HRGMv2_3994_120 HRGMv2_3994_120_11 11997 15578 + GH2
Gene ID: HRGMv2_3994_120_5
Type: TC
Location: 3167 - 4846 (+)
Gene ID: HRGMv2_3994_120_6
Type: TC
Location: 4927 - 5652 (+)
Gene ID: HRGMv2_3994_120_7
Type: TC
Location: 5663 - 6925 (+)
Gene ID: HRGMv2_3994_120_8
Type: TC
Location: 6972 - 8216 (+)
Gene ID: HRGMv2_3994_120_9
Type: pfam
Location: 8320 - 9435 (+)
Gene ID: HRGMv2_3994_120_10
Type: CAZyme
Location: 9651 - 11318 (-)
Gene ID: HRGMv2_3994_120_11
Type: CAZyme
Location: 11997 - 15578 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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