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Cluster: HRGMv2_3994_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3994_45 HRGMv2_3994_45_3 1284 2726 + 3.A.16.1.2
pfam HRGMv2_3994_45 HRGMv2_3994_45_4 2747 3616 + CTP_transf_1
NULL(UNKNOWN) HRGMv2_3994_45 HRGMv2_3994_45_5 3721 3867 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3994_45 HRGMv2_3994_45_6 3858 5123 + GH109
CAZyme HRGMv2_3994_45 HRGMv2_3994_45_7 5611 6015 - GT19
CAZyme HRGMv2_3994_45 HRGMv2_3994_45_8 5985 6602 - GT19
pfam HRGMv2_3994_45 HRGMv2_3994_45_9 6617 7369 - SurE
TC HRGMv2_3994_45 HRGMv2_3994_45_10 7560 8324 + 8.A.3.2.3
pfam HRGMv2_3994_45 HRGMv2_3994_45_11 8464 9390 + ParBc | HTH_ParB | ParB_dimer
pfam HRGMv2_3994_45 HRGMv2_3994_45_12 9393 10139 + DUF5683
CAZyme HRGMv2_3994_45 HRGMv2_3994_45_13 10205 11506 + GH23
Gene ID: HRGMv2_3994_45_3
Type: TC
Location: 1284 - 2726 (+)
Gene ID: HRGMv2_3994_45_4
Type: pfam
Location: 2747 - 3616 (+)
Gene ID: HRGMv2_3994_45_5
Type:
Location: 3721 - 3867 (+)
Gene ID: HRGMv2_3994_45_6
Type: CAZyme
Location: 3858 - 5123 (+)
Gene ID: HRGMv2_3994_45_7
Type: CAZyme
Location: 5611 - 6015 (-)
Gene ID: HRGMv2_3994_45_8
Type: CAZyme
Location: 5985 - 6602 (-)
Gene ID: HRGMv2_3994_45_9
Type: pfam
Location: 6617 - 7369 (-)
Gene ID: HRGMv2_3994_45_10
Type: TC
Location: 7560 - 8324 (+)
Gene ID: HRGMv2_3994_45_11
Type: pfam
Location: 8464 - 9390 (+)
Gene ID: HRGMv2_3994_45_12
Type: pfam
Location: 9393 - 10139 (+)
Gene ID: HRGMv2_3994_45_13
Type: CAZyme
Location: 10205 - 11506 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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