dbCAN Logo

Cluster: HRGMv2_3994_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3994_247 HRGMv2_3994_247_10 11134 13410 - 3.A.11.3.1
NULL(UNKNOWN) HRGMv2_3994_247 HRGMv2_3994_247_11 13434 13643 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3994_247 HRGMv2_3994_247_12 13698 16085 + GH127
TC HRGMv2_3994_247 HRGMv2_3994_247_13 16277 16888 - 1.B.44.2.1
pfam HRGMv2_3994_247 HRGMv2_3994_247_14 16956 17978 - GldN
TC HRGMv2_3994_247 HRGMv2_3994_247_15 18039 19583 - 9.A.25.1.1
pfam HRGMv2_3994_247 HRGMv2_3994_247_16 19647 20471 - GldL_N
TC HRGMv2_3994_247 HRGMv2_3994_247_17 20478 21902 - 9.A.25.1.1
pfam HRGMv2_3994_247 HRGMv2_3994_247_18 21932 22906 - PorP_SprF
TC HRGMv2_3994_247 HRGMv2_3994_247_19 23534 23911 - 1.A.43.1.13
Gene ID: HRGMv2_3994_247_10
Type: TC
Location: 11134 - 13410 (-)
Gene ID: HRGMv2_3994_247_11
Type:
Location: 13434 - 13643 (+)
Gene ID: HRGMv2_3994_247_12
Type: CAZyme
Location: 13698 - 16085 (+)
Gene ID: HRGMv2_3994_247_13
Type: TC
Location: 16277 - 16888 (-)
Gene ID: HRGMv2_3994_247_14
Type: pfam
Location: 16956 - 17978 (-)
Gene ID: HRGMv2_3994_247_15
Type: TC
Location: 18039 - 19583 (-)
Gene ID: HRGMv2_3994_247_16
Type: pfam
Location: 19647 - 20471 (-)
Gene ID: HRGMv2_3994_247_17
Type: TC
Location: 20478 - 21902 (-)
Gene ID: HRGMv2_3994_247_18
Type: pfam
Location: 21932 - 22906 (-)
Gene ID: HRGMv2_3994_247_19
Type: TC
Location: 23534 - 23911 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List