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Cluster: HRGMv2_3994_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3994_210 HRGMv2_3994_210_1 385 2925 - GH116
NULL(UNKNOWN) HRGMv2_3994_210 HRGMv2_3994_210_2 2980 3195 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3994_210 HRGMv2_3994_210_3 3138 3239 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3994_210 HRGMv2_3994_210_4 3436 4425 - GH43_34
pfam HRGMv2_3994_210 HRGMv2_3994_210_5 4724 4942 + TatA_B_E
TC HRGMv2_3994_210 HRGMv2_3994_210_6 4961 5794 + 2.A.64.3.2
pfam HRGMv2_3994_210 HRGMv2_3994_210_7 5810 6901 + GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3
CAZyme HRGMv2_3994_210 HRGMv2_3994_210_8 6975 8447 + GH109
Gene ID: HRGMv2_3994_210_1
Type: CAZyme
Location: 385 - 2925 (-)
Gene ID: HRGMv2_3994_210_2
Type:
Location: 2980 - 3195 (+)
Gene ID: HRGMv2_3994_210_3
Type:
Location: 3138 - 3239 (+)
Gene ID: HRGMv2_3994_210_4
Type: CAZyme
Location: 3436 - 4425 (-)
Gene ID: HRGMv2_3994_210_5
Type: pfam
Location: 4724 - 4942 (+)
Gene ID: HRGMv2_3994_210_6
Type: TC
Location: 4961 - 5794 (+)
Gene ID: HRGMv2_3994_210_7
Type: pfam
Location: 5810 - 6901 (+)
Gene ID: HRGMv2_3994_210_8
Type: CAZyme
Location: 6975 - 8447 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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