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Genome Details

Selected Rep_genome_ID: HRGMv2_3982
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Rikenellaceae
→
Genus
Alistipes
→
Species
Alistipes sp022767745
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_3982 2,588,597 98.55% 0.881% South Korea Asia HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_3982_CGC11 CGCFAM_00001 Yes 11 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3982_CGC34 CGCFAM_00113 Yes 3 1
HRGMv2_3982_CGC17 CGCFAM_00183 Yes 10 2 pectin/host glycan
HRGMv2_3982_CGC25 CGCFAM_00511 Yes 6 1
HRGMv2_3982_CGC16 CGCFAM_01302 Yes 11 2
HRGMv2_3982_CGC36 CGCFAM_01911 Yes 4 3
HRGMv2_3982_CGC40 CGCFAM_02407 Yes 5 1
HRGMv2_3982_CGC39 CGCFAM_02408 Yes 11 3
HRGMv2_3982_CGC35 CGCFAM_03093 Yes 11 4
HRGMv2_3982_CGC2 CGCFAM_04386 Yes 5 2
HRGMv2_3982_CGC9 CGCFAM_04388 Yes 7 3
HRGMv2_3982_CGC15 CGCFAM_04389 Yes 4 1
HRGMv2_3982_CGC23 CGCFAM_04391 Yes 6 1
HRGMv2_3982_CGC7 CGCFAM_04393 Yes 3 1
HRGMv2_3982_CGC18 CGCFAM_04394 Yes 3 2
HRGMv2_3982_CGC19 CGCFAM_05482 Yes 3 1
HRGMv2_3982_CGC42 CGCFAM_06240 Yes 5 1
HRGMv2_3982_CGC12 CGCFAM_06256 Yes 3 1
HRGMv2_3982_CGC41 CGCFAM_06733 Yes 10 6
HRGMv2_3982_CGC4 CGCFAM_06735 Yes 3 1
HRGMv2_3982_CGC5 CGCFAM_08990 Yes 3 1
HRGMv2_3982_CGC1 CGCFAM_09663 Yes 7 1
HRGMv2_3982_CGC10 CGCFAM_10508 Yes 5 2
Top CAZyme Families