dbCAN Logo

Cluster: HRGMv2_3982_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3982_12 HRGMv2_3982_12_19 23066 24271 + 1.A.23.4.5
pfam HRGMv2_3982_12 HRGMv2_3982_12_20 24333 25130 - BSP
CAZyme HRGMv2_3982_12 HRGMv2_3982_12_21 25166 27535 - GH92
CAZyme HRGMv2_3982_12 HRGMv2_3982_12_22 27627 30536 - GH2
CAZyme HRGMv2_3982_12 HRGMv2_3982_12_23 30549 32117 - CBM91 | GH43_10
CAZyme HRGMv2_3982_12 HRGMv2_3982_12_24 32216 34693 - GH35
CAZyme HRGMv2_3982_12 HRGMv2_3982_12_25 34750 36450 - CBM32 | GH43_28
pfam HRGMv2_3982_12 HRGMv2_3982_12_26 36531 39374 - NPCBM
NULL(UNKNOWN) HRGMv2_3982_12 HRGMv2_3982_12_27 39404 41662 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3982_12 HRGMv2_3982_12_28 41971 44199 - GH182
Gene ID: HRGMv2_3982_12_19
Type: TC
Location: 23066 - 24271 (+)
Gene ID: HRGMv2_3982_12_20
Type: pfam
Location: 24333 - 25130 (-)
Gene ID: HRGMv2_3982_12_21
Type: CAZyme
Location: 25166 - 27535 (-)
Gene ID: HRGMv2_3982_12_22
Type: CAZyme
Location: 27627 - 30536 (-)
Gene ID: HRGMv2_3982_12_23
Type: CAZyme
Location: 30549 - 32117 (-)
Gene ID: HRGMv2_3982_12_24
Type: CAZyme
Location: 32216 - 34693 (-)
Gene ID: HRGMv2_3982_12_25
Type: CAZyme
Location: 34750 - 36450 (-)
Gene ID: HRGMv2_3982_12_26
Type: pfam
Location: 36531 - 39374 (-)
Gene ID: HRGMv2_3982_12_27
Type:
Location: 39404 - 41662 (-)
Gene ID: HRGMv2_3982_12_28
Type: CAZyme
Location: 41971 - 44199 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List