PROTEIN: HRGMv2_3982_12_27
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Protein File & Metadata
Source:
HRGMv2_3982_12_27.pdb
Genome ID:
Protein ID:
HRGMv2_3982_12_27
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Protein Sequence
MRAFVVTCVL AMLLCGSAEA RPRTFSTDYF RIEVDGRGYV VGMWNRADGG RNFSPADRPS 60 PLLALYDETL KRYYYPQHAE YERGRYRLEY SNGSVATVRL EEKPRYIKLT LEALDNRDAI 120 GSVQWGNFYT NIDNLVGEII GVARDTSAAV NYAIGVLALD DNTIGGEAHY TSDTGWGGYI 180 VHTPDAGSHP LPLTLHEGDQ FTLGGDGHND VAFYNRRESY FRMMYGNSAG VDDNGRINIR 240 YVSRDRRKGR MIYSPEGTPI FVNNEPNHLQ RQDVPGVDYI GSSIALWGAP DDKALMHVIR 300 EAVLAEGLPY PTVRGRWVKD PTSFEPDVWV SGGGYDSIAS YTRQMGLHGV HAYDLGFLRP 360 DRGNGGLIDG RNGERKPIRM ASGNLSHREY ADLLARDSII LGRTTITNSL APGTMDCSPV 420 PSDSICIQHR RFLTAPVSAE DTLIYIDDPT HLEEIACWEA HDKELNMVRI GKELIHYLGV 480 TTTPPYRLLN VTRGYWNTVA APHDAGDAVD KMQVTVGWGY AGLVPNLELQ DEIGRWYAAT 540 ARQCGLGMYD LDGQEFLFHS GFGTYSVKRF FRSVFERARE YGLRDLRFTG ATLSEGSWHY 600 QSVWNVGGGL NIYDVDKRVW GSTTSQGKDL RDVTYANFFP SSFGVNFPIG ENSTAEQYEH 660 IEATAVGYGA TYFLRINQND VEKCPQKYAI FKVIRTWERA RRADAFPTHI KRLLQDASLS 720 WRLEEGADGN SWTLYQMEDG RKVRSYELHG NL 752
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1H1WL16-F1-model_v4 | GH36 | 16 | 750 | 33 | 688 | 0.5832 |
0.6506 |
| AF-H9UCS6-F1-model_v4 | GH31 | 17 | 752 | 4 | 665 | 0.5579 |
0.6117 |
| H9UCS6 | GH31 | 17 | 752 | 4 | 665 | 0.5579 |
0.6117 |
| AF-A0A7G9P4N8-F1-model_v4 | GH0 | 18 | 752 | 32 | 745 | 0.5296 |
0.5719 |
| AF-A0A7G9BNF0-F1-model_v4 | GH0 | 15 | 752 | 45 | 777 | 0.5243 |
0.5621 |
| AF-D2KZ11-F1-model_v4 | GH36 | 23 | 752 | 2 | 680 | 0.487 |
0.5494 |
| AF-A0A1Z2L8L0-F1-model_v4 | GH101 | 5 | 750 | 53 | 676 | 0.4759 |
0.6612 |
| AF-A0A3Q9FVH9-F1-model_v4 | GH101 | 17 | 750 | 31 | 640 | 0.4706 |
0.657 |
| AF-A0A6H1JJY7-F1-model_v4 | GH101 | 14 | 750 | 37 | 652 | 0.4705 |
0.6542 |
| AF-A0A6C1C1H1-F1-model_v4 | GH101 | 7 | 750 | 31 | 655 | 0.4703 |
0.6483 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G3V291 | GH36 | 16 | 746 | 1 | 616 | 0.6078 |
0.6819 |
| QGM92380.1 | GH36 | 23 | 748 | 1 | 632 | 0.5879 |
0.6509 |
| A0A1H1TF09 | GH36 | 26 | 738 | 7 | 544 | 0.5707 |
0.6861 |
| H9UCS6 | GH31 | 17 | 752 | 4 | 665 | 0.5579 |
0.6117 |
| A0A7G9P174 | GH36 | 17 | 752 | 22 | 685 | 0.5529 |
0.6364 |
| A0A3E0AFM9 | GH36 | 19 | 745 | 1 | 762 | 0.5526 |
0.5941 |
| F3PMH4 | GH36 | 15 | 752 | 18 | 690 | 0.5509 |
0.628 |
| A0A6I6JSZ4 | GH36 | 14 | 751 | 39 | 750 | 0.5494 |
0.5925 |
| WBA87194.1 | GH36 | 24 | 752 | 1 | 626 | 0.5203 |
0.6065 |
| I6Z2F5 | GH31 | 24 | 752 | 26 | 671 | 0.5176 |
0.5919 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6gta-assembly1.cif.gz_A | 44 | 747 | 1 | 531 | 0.5716 |
0.6802 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.