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Cluster: HRGMv2_3982_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3982_2 HRGMv2_3982_2_43 72090 74078 + 3.D.1.9.1
TC HRGMv2_3982_2 HRGMv2_3982_2_44 74083 75003 + 3.D.1.9.3
NULL(UNKNOWN) HRGMv2_3982_2 HRGMv2_3982_2_45 75008 75637 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3982_2 HRGMv2_3982_2_46 75657 77060 + 3.D.1.9.1
TC HRGMv2_3982_2 HRGMv2_3982_2_47 77063 78580 + 3.D.1.9.3
TC HRGMv2_3982_2 HRGMv2_3982_2_48 78602 79363 + 3.D.1.4.3
pfam HRGMv2_3982_2 HRGMv2_3982_2_49 79444 80589 - Metallophos
STP HRGMv2_3982_2 HRGMv2_3982_2_50 81172 82332 + FecR
TC HRGMv2_3982_2 HRGMv2_3982_2_51 82559 85834 + 1.B.14.6.1
pfam HRGMv2_3982_2 HRGMv2_3982_2_52 85849 87660 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_3982_2 HRGMv2_3982_2_53 87699 88694 + CBM32
Gene ID: HRGMv2_3982_2_43
Type: TC
Location: 72090 - 74078 (+)
Gene ID: HRGMv2_3982_2_44
Type: TC
Location: 74083 - 75003 (+)
Gene ID: HRGMv2_3982_2_45
Type:
Location: 75008 - 75637 (+)
Gene ID: HRGMv2_3982_2_46
Type: TC
Location: 75657 - 77060 (+)
Gene ID: HRGMv2_3982_2_47
Type: TC
Location: 77063 - 78580 (+)
Gene ID: HRGMv2_3982_2_48
Type: TC
Location: 78602 - 79363 (+)
Gene ID: HRGMv2_3982_2_49
Type: pfam
Location: 79444 - 80589 (-)
Gene ID: HRGMv2_3982_2_50
Type: STP
Location: 81172 - 82332 (+)
Gene ID: HRGMv2_3982_2_51
Type: TC
Location: 82559 - 85834 (+)
Gene ID: HRGMv2_3982_2_52
Type: pfam
Location: 85849 - 87660 (+)
Gene ID: HRGMv2_3982_2_53
Type: CAZyme
Location: 87699 - 88694 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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