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Cluster: HRGMv2_3982_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3982_2 HRGMv2_3982_2_333 437785 440214 - GH106
peptidase HRGMv2_3982_2 HRGMv2_3982_2_334 440254 441786 - M81.UPW
TC HRGMv2_3982_2 HRGMv2_3982_2_335 441965 442723 - 3.A.1.13.2
TC HRGMv2_3982_2 HRGMv2_3982_2_336 442735 443739 - 3.A.1.13.2
TC HRGMv2_3982_2 HRGMv2_3982_2_337 443756 444892 - 3.A.1.13.2
pfam HRGMv2_3982_2 HRGMv2_3982_2_338 444889 446736 - Sulfatase
STP HRGMv2_3982_2 HRGMv2_3982_2_339 446888 447451 - Sigma70_r2 | Sigma70_r4_2
CAZyme HRGMv2_3982_2 HRGMv2_3982_2_340 447442 448599 - GT2
sulfatase HRGMv2_3982_2 HRGMv2_3982_2_341 448788 450338 + S1_16
pfam HRGMv2_3982_2 HRGMv2_3982_2_342 450428 451828 - Oxidoreduct_C
TC HRGMv2_3982_2 HRGMv2_3982_2_343 451968 453206 - 2.A.1.2.18
Gene ID: HRGMv2_3982_2_333
Type: CAZyme
Location: 437785 - 440214 (-)
Gene ID: HRGMv2_3982_2_334
Type: peptidase
Location: 440254 - 441786 (-)
Gene ID: HRGMv2_3982_2_335
Type: TC
Location: 441965 - 442723 (-)
Gene ID: HRGMv2_3982_2_336
Type: TC
Location: 442735 - 443739 (-)
Gene ID: HRGMv2_3982_2_337
Type: TC
Location: 443756 - 444892 (-)
Gene ID: HRGMv2_3982_2_338
Type: pfam
Location: 444889 - 446736 (-)
Gene ID: HRGMv2_3982_2_339
Type: STP
Location: 446888 - 447451 (-)
Gene ID: HRGMv2_3982_2_340
Type: CAZyme
Location: 447442 - 448599 (-)
Gene ID: HRGMv2_3982_2_341
Type: sulfatase
Location: 448788 - 450338 (+)
Gene ID: HRGMv2_3982_2_342
Type: pfam
Location: 450428 - 451828 (-)
Gene ID: HRGMv2_3982_2_343
Type: TC
Location: 451968 - 453206 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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