Genome Details
Selected Rep_genome_ID: HRGMv2_3704
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera sp002319965
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3704 | 2,449,436 | 100% | 0% | Japan | Asia | HRGM |
| MGYG000002994 | 2,223,689 | 99.7% | 0% | United States | North America | UHGG |
| Rep_1938 | 2,317,064 | 98.2036% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3704_CGC3 | CGCFAM_00002 | Yes | 7 | 6 | |
| HRGMv2_3704_CGC13 | CGCFAM_00077 | Yes | 7 | 1 | |
| HRGMv2_3704_CGC5 | CGCFAM_01128 | Yes | 16 | 1 | |
| HRGMv2_3704_CGC4 | CGCFAM_01389 | Yes | 4 | 1 | |
| HRGMv2_3704_CGC14 | CGCFAM_01931 | Yes | 19 | 2 | |
| HRGMv2_3704_CGC17 | CGCFAM_02242 | Yes | 6 | 4 | |
| HRGMv2_3704_CGC11 | CGCFAM_02425 | Yes | 18 | 1 | |
| HRGMv2_3704_CGC8 | CGCFAM_02426 | Yes | 16 | 2 |
Top CAZyme Families